Nov 29, 2019 FigTree v1.3.1 was used to visualize the tree. Construction of Plasmid Vectors. Specific binding of the radio ligands was defined as total binding minus that occurring in the presence of 1000-fold molar excess of unlabeled ATRA (A,B) or 9cisRA (C). Results were expressed as percentage of specific binding of the radio ligands. Morphology, ontogenesis and molecular phylogeny of Platynematum salinarum nov. Spec., a new scuticociliate (Ciliophora, Scuticociliatia) from a solar saltern. Trees were visualized with FigTree v1.3.1. Which is the accumulation of molar concentrations of chloride and potassium.
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- Alpha particle molar mass. 0.79127 kg mol^-1. Alpha particle-electron mass ratio. Alpha particle-proton mass ratio. Angstrom star. 1.00001495e-10 m. Atomic mass constant. 1.66053904e-27 kg. Atomic mass constant energy equivalent. 1.492418062e-10 J. Atomic mass constant energy equivalent in MeV.
- Mandible without palp, molar and incisor processes poorly developed, primordium of molar process with 4–5 minute denticles, area of incisor process smooth (Supplementary material Fig. Maxillule rudimentary, endites starting to develop, each with 2 spines; palp indicated by spine on small indentation (Supplementary material Fig.
- These were affinity purified and titrated against thylakoid protein preparations. The amounts of NdhH detected were equivalent to ∼0.09 mmol/mol chlorophyll, corresponding to ∼5% of the PSI or PSII level on a molar basis (Kirchhoff et al., 2002).
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AAindex database
The modified AAindex database with 533 descriptors for the twenty amino acids.
- Keywords
- AAIndex
Usage
Details
1 alpha-CH_chemical_shifts_(Andersen_et_al.,_1992)
2 Hydrophobicity_index_(Argos_et_al.,_1982)
3 Signal_sequence_helical_potential_(Argos_et_al.,_1982)
4 Membrane-buried_preference_parameters_(Argos_et_al.,_1982)
5 Conformational_parameter_of_inner_helix_(Beghin-Dirkx,_1975)
6 Conformational_parameter_of_beta-structure_(Beghin-Dirkx,_1975)
7 Conformational_parameter_of_beta-turn_(Beghin-Dirkx,_1975)
8 Average_flexibility_indices_(Bhaskaran-Ponnuswamy,_1988)
9 Residue_volume_(Bigelow,_1967)
10 Information_value_for_accessibility;_average_fraction_35
11 Information_value_for_accessibility;_average_fraction_23
12 Retention_coefficient_in_TFA_(Browne_et_al.,_1982)
13 Retention_coefficient_in_HFBA_(Browne_et_al.,_1982)
14 Transfer_free_energy_to_surface_(Bull-Breese,_1974)
15 Apparent_partial_specific_volume_(Bull-Breese,_1974)
16 alpha-NH_chemical_shifts_(Bundi-Wuthrich,_1979)
17 alpha-CH_chemical_shifts_(Bundi-Wuthrich,_1979)
18 Spin-spin_coupling_constants_3JHalpha-NH_(Bundi-Wuthrich,_1979)
19 Normalized_frequency_of_alpha-helix_(Burgess_et_al.,_1974)
20 Normalized_frequency_of_extended_structure_(Burgess_et_al.,_1974)
21 Steric_parameter_(Charton,_1981)
22 Polarizability_parameter_(Charton-Charton,_1982)
23 Free_energy_of_solution_in_water,_kcal/mole_(Charton-Charton,_1982)
24 The_Chou-Fasman_parameter_of_the_coil_conformation_(Charton-Charton,_1983)
25 A_parameter_defined_from_the_residuals_obtained_from_the_best_correlation_of_the_Chou-Fasman_parameter_of_beta-sheet_(Charton-Charton,_1983)
26 The_number_of_atoms_in_the_side_chain_labelled_1+1_(Charton-Charton,_1983)
27 The_number_of_atoms_in_the_side_chain_labelled_2+1_(Charton-Charton,_1983)
28 The_number_of_atoms_in_the_side_chain_labelled_3+1_(Charton-Charton,_1983)
29 The_number_of_bonds_in_the_longest_chain_(Charton-Charton,_1983)
30 A_parameter_of_charge_transfer_capability_(Charton-Charton,_1983)
31 A_parameter_of_charge_transfer_donor_capability_(Charton-Charton,_1983)
32 Average_volume_of_buried_residue_(Chothia,_1975)
33 Residue_accessible_surface_area_in_tripeptide_(Chothia,_1976)
34 Residue_accessible_surface_area_in_folded_protein_(Chothia,_1976)
35 Proportion_of_residues_95
36 Proportion_of_residues_100
37 Normalized_frequency_of_beta-turn_(Chou-Fasman,_1978a)
38 Normalized_frequency_of_alpha-helix_(Chou-Fasman,_1978b)
39 Normalized_frequency_of_beta-sheet_(Chou-Fasman,_1978b)
40 Normalized_frequency_of_beta-turn_(Chou-Fasman,_1978b)
41 Normalized_frequency_of_N-terminal_helix_(Chou-Fasman,_1978b)
42 Normalized_frequency_of_C-terminal_helix_(Chou-Fasman,_1978b)
43 Normalized_frequency_of_N-terminal_non_helical_region_(Chou-Fasman,_1978b)
44 Normalized_frequency_of_C-terminal_non_helical_region_(Chou-Fasman,_1978b)
45 Normalized_frequency_of_N-terminal_beta-sheet_(Chou-Fasman,_1978b)
46 Normalized_frequency_of_C-terminal_beta-sheet_(Chou-Fasman,_1978b)
47 Normalized_frequency_of_N-terminal_non_beta_region_(Chou-Fasman,_1978b)
48 Normalized_frequency_of_C-terminal_non_beta_region_(Chou-Fasman,_1978b)
49 Frequency_of_the_1st_residue_in_turn_(Chou-Fasman,_1978b)
50 Frequency_of_the_2nd_residue_in_turn_(Chou-Fasman,_1978b)
51 Frequency_of_the_3rd_residue_in_turn_(Chou-Fasman,_1978b)
52 Frequency_of_the_4th_residue_in_turn_(Chou-Fasman,_1978b)
53 Normalized_frequency_of_the_2nd_and_3rd_residues_in_turn_(Chou-Fasman,_1978b)
54 Normalized_hydrophobicity_scales_for_alpha-proteins_(Cid_et_al.,_1992)
55 Normalized_hydrophobicity_scales_for_beta-proteins_(Cid_et_al.,_1992)
56 Normalized_hydrophobicity_scales_for_alpha+beta-proteins_(Cid_et_al.,_1992)
57 Normalized_hydrophobicity_scales_for_alpha/beta-proteins_(Cid_et_al.,_1992)
58 Normalized_average_hydrophobicity_scales_(Cid_et_al.,_1992)
59 Partial_specific_volume_(Cohn-Edsall,_1943)
60 Normalized_frequency_of_middle_helix_(Crawford_et_al.,_1973)
61 Normalized_frequency_of_beta-sheet_(Crawford_et_al.,_1973)
62 Normalized_frequency_of_turn_(Crawford_et_al.,_1973)
63 Size_(Dawson,_1972)
64 Amino_acid_composition_(Dayhoff_et_al.,_1978a)
65 Relative_mutability_(Dayhoff_et_al.,_1978b)
66 Membrane_preference_for_cytochrome_b:_MPH89_(Degli_Esposti_et_al.,_1990)
67 Average_membrane_preference:_AMP07
68 Consensus_normalized_hydrophobicity_scale_(Eisenberg,_1984)
69 Solvation_free_energy_(Eisenberg-McLachlan,_1986)
70 Atom-based_hydrophobic_moment_(Eisenberg-McLachlan,_1986)
71 Direction_of_hydrophobic_moment_(Eisenberg-McLachlan,_1986)
72 Molecular_weight_(Fasman,_1976)
73 Melting_point_(Fasman,_1976)
74 Optical_rotation_(Fasman,_1976)
75 pK-N_(Fasman,_1976)
76 pK-C_(Fasman,_1976)
77 Hydrophobic_parameter_pi_(Fauchere-Pliska,_1983)
78 Graph_shape_index_(Fauchere_et_al.,_1988)
79 Smoothed_upsilon_steric_parameter_(Fauchere_et_al.,_1988)
80 Normalized_van_der_Waals_volume_(Fauchere_et_al.,_1988)
81 STERIMOL_length_of_the_side_chain_(Fauchere_et_al.,_1988)
82 STERIMOL_minimum_width_of_the_side_chain_(Fauchere_et_al.,_1988)
83 STERIMOL_maximum_width_of_the_side_chain_(Fauchere_et_al.,_1988)
84 N.m.r._chemical_shift_of_alpha-carbon_(Fauchere_et_al.,_1988)
85 Localized_electrical_effect_(Fauchere_et_al.,_1988)
86 Number_of_hydrogen_bond_donors_(Fauchere_et_al.,_1988)
87 Number_of_full_nonbonding_orbitals_(Fauchere_et_al.,_1988)
88 Positive_charge_(Fauchere_et_al.,_1988)
89 Negative_charge_(Fauchere_et_al.,_1988)
90 pK-a(RCOOH)_(Fauchere_et_al.,_1988)
91 Helix-coil_equilibrium_constant_(Finkelstein-Ptitsyn,_1977)
92 Helix_initiation_parameter_at_posision_i-1_(Finkelstein_et_al.,_1991)
93 Helix_initiation_parameter_at_posision_i,i+1,i+2_(Finkelstein_et_al.,_1991)
94 Helix_termination_parameter_at_posision_j-2,j-1,j_(Finkelstein_et_al.,_1991)
95 Helix_termination_parameter_at_posision_j+1_(Finkelstein_et_al.,_1991)
96 Partition_coefficient_(Garel_et_al.,_1973)
97 Alpha-helix_indices_(Geisow-Roberts,_1980)
98 Alpha-helix_indices_for_alpha-proteins_(Geisow-Roberts,_1980)
99 Alpha-helix_indices_for_beta-proteins_(Geisow-Roberts,_1980)
100 Alpha-helix_indices_for_alpha/beta-proteins_(Geisow-Roberts,_1980)
101 Beta-strand_indices_(Geisow-Roberts,_1980)
102 Beta-strand_indices_for_beta-proteins_(Geisow-Roberts,_1980)
103 Beta-strand_indices_for_alpha/beta-proteins_(Geisow-Roberts,_1980)
104 Aperiodic_indices_(Geisow-Roberts,_1980)
105 Aperiodic_indices_for_alpha-proteins_(Geisow-Roberts,_1980)
106 Aperiodic_indices_for_beta-proteins_(Geisow-Roberts,_1980)
107 Aperiodic_indices_for_alpha/beta-proteins_(Geisow-Roberts,_1980)
108 Hydrophobicity_factor_(Goldsack-Chalifoux,_1973)
109 Residue_volume_(Goldsack-Chalifoux,_1973)
110 Composition_(Grantham,_1974)
111 Polarity_(Grantham,_1974)
112 Volume_(Grantham,_1974)
113 Partition_energy_(Guy,_1985)
114 Hydration_number_(Hopfinger,_1971),_Cited_by_Charton-Charton_(1982)
115 Hydrophilicity_value_(Hopp-Woods,_1981)
116 Heat_capacity_(Hutchens,_1970)
117 Absolute_entropy_(Hutchens,_1970)
118 Entropy_of_formation_(Hutchens,_1970)
119 Normalized_relative_frequency_of_alpha-helix_(Isogai_et_al.,_1980)
120 Normalized_relative_frequency_of_extended_structure_(Isogai_et_al.,_1980)
121 Normalized_relative_frequency_of_bend_(Isogai_et_al.,_1980)
122 Normalized_relative_frequency_of_bend_R_(Isogai_et_al.,_1980)
123 Normalized_relative_frequency_of_bend_S_(Isogai_et_al.,_1980)
124 Normalized_relative_frequency_of_helix_end_(Isogai_et_al.,_1980)
125 Normalized_relative_frequency_of_double_bend_(Isogai_et_al.,_1980)
126 Normalized_relative_frequency_of_coil_(Isogai_et_al.,_1980)
127 Average_accessible_surface_area_(Janin_et_al.,_1978)
128 Percentage_of_buried_residues_(Janin_et_al.,_1978)
129 Percentage_of_exposed_residues_(Janin_et_al.,_1978)
130 Ratio_of_buried_and_accessible_molar_fractions_(Janin,_1979)
131 Transfer_free_energy_(Janin,_1979)
132 Hydrophobicity_(Jones,_1975)
133 pK_(-COOH)_(Jones,_1975)
134 Relative_frequency_of_occurrence_(Jones_et_al.,_1992)
135 Relative_mutability_(Jones_et_al.,_1992)
136 Amino_acid_distribution_(Jukes_et_al.,_1975)
137 Sequence_frequency_(Jungck,_1978)
138 Average_relative_probability_of_helix_(Kanehisa-Tsong,_1980)
139 Average_relative_probability_of_beta-sheet_(Kanehisa-Tsong,_1980)
140 Average_relative_probability_of_inner_helix_(Kanehisa-Tsong,_1980)
141 Average_relative_probability_of_inner_beta-sheet_(Kanehisa-Tsong,_1980)
142 Flexibility_parameter_for_no_rigid_neighbors_(Karplus-Schulz,_1985)
143 Flexibility_parameter_for_one_rigid_neighbor_(Karplus-Schulz,_1985)
144 Flexibility_parameter_for_two_rigid_neighbors_(Karplus-Schulz,_1985)
145 The_Kerr-constant_increments_(Khanarian-Moore,_1980)
146 Net_charge_(Klein_et_al.,_1984)
147 Side_chain_interaction_parameter_(Krigbaum-Rubin,_1971)
148 Side_chain_interaction_parameter_(Krigbaum-Komoriya,_1979)
149 Fraction_of_site_occupied_by_water_(Krigbaum-Komoriya,_1979)
150 Side_chain_volume_(Krigbaum-Komoriya,_1979)
151 Hydropathy_index_(Kyte-Doolittle,_1982)
152 Transfer_free_energy,_CHP/water_(Lawson_et_al.,_1984)
153 Hydrophobic_parameter_(Levitt,_1976)
154 Distance_between_C-alpha_and_centroid_of_side_chain_(Levitt,_1976)
155 Side_chain_angle_theta(AAR)_(Levitt,_1976)
156 Side_chain_torsion_angle_phi(AAAR)_(Levitt,_1976)
157 Radius_of_gyration_of_side_chain_(Levitt,_1976)
158 van_der_Waals_parameter_R0_(Levitt,_1976)
159 van_der_Waals_parameter_epsilon_(Levitt,_1976)
160 Normalized_frequency_of_alpha-helix,_with_weights_(Levitt,_1978)
161 Normalized_frequency_of_beta-sheet,_with_weights_(Levitt,_1978)
162 Normalized_frequency_of_reverse_turn,_with_weights_(Levitt,_1978)
163 Normalized_frequency_of_alpha-helix,_unweighted_(Levitt,_1978)
164 Normalized_frequency_of_beta-sheet,_unweighted_(Levitt,_1978)
165 Normalized_frequency_of_reverse_turn,_unweighted_(Levitt,_1978)
166 Frequency_of_occurrence_in_beta-bends_(Lewis_et_al.,_1971)
167 Conformational_preference_for_all_beta-strands_(Lifson-Sander,_1979)
168 Conformational_preference_for_parallel_beta-strands_(Lifson-Sander,_1979)
169 Conformational_preference_for_antiparallel_beta-strands_(Lifson-Sander,_1979)
170 Average_surrounding_hydrophobicity_(Manavalan-Ponnuswamy,_1978)
171 Normalized_frequency_of_alpha-helix_(Maxfield-Scheraga,_1976)
172 Normalized_frequency_of_extended_structure_(Maxfield-Scheraga,_1976)
173 Normalized_frequency_of_zeta_R_(Maxfield-Scheraga,_1976)
174 Normalized_frequency_of_left-handed_alpha-helix_(Maxfield-Scheraga,_1976)
175 Normalized_frequency_of_zeta_L_(Maxfield-Scheraga,_1976)
176 Normalized_frequency_of_alpha_region_(Maxfield-Scheraga,_1976)
177 Refractivity_(McMeekin_et_al.,_1964),_Cited_by_Jones_(1975)
178 Retention_coefficient_in_HPLC,_pH7.4_(Meek,_1980)
179 Retention_coefficient_in_HPLC,_pH2.1_(Meek,_1980)
180 Retention_coefficient_in_NaClO4_(Meek-Rossetti,_1981)
181 Retention_coefficient_in_NaH2PO4_(Meek-Rossetti,_1981)
182 Average_reduced_distance_for_C-alpha_(Meirovitch_et_al.,_1980)
183 Average_reduced_distance_for_side_chain_(Meirovitch_et_al.,_1980)
184 Average_side_chain_orientation_angle_(Meirovitch_et_al.,_1980)
185 Effective_partition_energy_(Miyazawa-Jernigan,_1985)
186 Normalized_frequency_of_alpha-helix_(Nagano,_1973)
187 Normalized_frequency_of_bata-structure_(Nagano,_1973)
188 Normalized_frequency_of_coil_(Nagano,_1973)
189 AA_composition_of_total_proteins_(Nakashima_et_al.,_1990)
190 SD_of_AA_composition_of_total_proteins_(Nakashima_et_al.,_1990)
191 AA_composition_of_mt-proteins_(Nakashima_et_al.,_1990)
192 Normalized_composition_of_mt-proteins_(Nakashima_et_al.,_1990)
193 AA_composition_of_mt-proteins_from_animal_(Nakashima_et_al.,_1990)
194 Normalized_composition_from_animal_(Nakashima_et_al.,_1990)
195 AA_composition_of_mt-proteins_from_fungi_and_plant_(Nakashima_et_al.,_1990)
196 Normalized_composition_from_fungi_and_plant_(Nakashima_et_al.,_1990)
197 AA_composition_of_membrane_proteins_(Nakashima_et_al.,_1990)
198 Normalized_composition_of_membrane_proteins_(Nakashima_et_al.,_1990)
199 Transmembrane_regions_of_non-mt-proteins_(Nakashima_et_al.,_1990)
200 Transmembrane_regions_of_mt-proteins_(Nakashima_et_al.,_1990)
201 Ratio_of_average_and_computed_composition_(Nakashima_et_al.,_1990)
202 AA_composition_of_CYT_of_single-spanning_proteins_(Nakashima-Nishikawa,_1992)
203 AA_composition_of_CYT2_of_single-spanning_proteins_(Nakashima-Nishikawa,_1992)
204 AA_composition_of_EXT_of_single-spanning_proteins_(Nakashima-Nishikawa,_1992)
205 AA_composition_of_EXT2_of_single-spanning_proteins_(Nakashima-Nishikawa,_1992)
206 AA_composition_of_MEM_of_single-spanning_proteins_(Nakashima-Nishikawa,_1992)
207 AA_composition_of_CYT_of_multi-spanning_proteins_(Nakashima-Nishikawa,_1992)
208 AA_composition_of_EXT_of_multi-spanning_proteins_(Nakashima-Nishikawa,_1992)
209 AA_composition_of_MEM_of_multi-spanning_proteins_(Nakashima-Nishikawa,_1992)
210 8_A_contact_number_(Nishikawa-Ooi,_1980)
211 14
212 Transfer_energy,_organic_solvent/water_(Nozaki-Tanford,_1971)
213 Average_non-bonded_energy_per_atom_(Oobatake-Ooi,_1977)
214 Short_and_medium_range_non-bonded_energy_per_atom_(Oobatake-Ooi,_1977)
215 Long_range_non-bonded_energy_per_atom_(Oobatake-Ooi,_1977)
216 Average_non-bonded_energy_per_residue_(Oobatake-Ooi,_1977)
217 Short_and_medium_range_non-bonded_energy_per_residue_(Oobatake-Ooi,_1977)
218 Optimized_beta-structure-coil_equilibrium_constant_(Oobatake_et_al.,_1985)
219 Optimized_propensity_to_form_reverse_turn_(Oobatake_et_al.,_1985)
220 Optimized_transfer_energy_parameter_(Oobatake_et_al.,_1985)
221 Optimized_average_non-bonded_energy_per_atom_(Oobatake_et_al.,_1985)
222 Optimized_side_chain_interaction_parameter_(Oobatake_et_al.,_1985)
223 Normalized_frequency_of_alpha-helix_from_LG_(Palau_et_al.,_1981)
224 Normalized_frequency_of_alpha-helix_from_CF_(Palau_et_al.,_1981)
225 Normalized_frequency_of_beta-sheet_from_LG_(Palau_et_al.,_1981)
226 Normalized_frequency_of_beta-sheet_from_CF_(Palau_et_al.,_1981)
227 Normalized_frequency_of_turn_from_LG_(Palau_et_al.,_1981)
228 Normalized_frequency_of_turn_from_CF_(Palau_et_al.,_1981)
229 Normalized_frequency_of_alpha-helix_in_all-alpha_class_(Palau_et_al.,_1981)
230 Normalized_frequency_of_alpha-helix_in_alpha+beta_class_(Palau_et_al.,_1981)
231 Normalized_frequency_of_alpha-helix_in_alpha/beta_class_(Palau_et_al.,_1981)
232 Normalized_frequency_of_beta-sheet_in_all-beta_class_(Palau_et_al.,_1981)
233 Normalized_frequency_of_beta-sheet_in_alpha+beta_class_(Palau_et_al.,_1981)
234 Normalized_frequency_of_beta-sheet_in_alpha/beta_class_(Palau_et_al.,_1981)
235 Normalized_frequency_of_turn_in_all-alpha_class_(Palau_et_al.,_1981)
236 Normalized_frequency_of_turn_in_all-beta_class_(Palau_et_al.,_1981)
237 Normalized_frequency_of_turn_in_alpha+beta_class_(Palau_et_al.,_1981)
238 Normalized_frequency_of_turn_in_alpha/beta_class_(Palau_et_al.,_1981)
239 HPLC_parameter_(Parker_et_al.,_1986)
240 Partition_coefficient_(Pliska_et_al.,_1981)
241 Surrounding_hydrophobicity_in_folded_form_(Ponnuswamy_et_al.,_1980)
242 Average_gain_in_surrounding_hydrophobicity_(Ponnuswamy_et_al.,_1980)
243 Average_gain_ratio_in_surrounding_hydrophobicity_(Ponnuswamy_et_al.,_1980)
244 Surrounding_hydrophobicity_in_alpha-helix_(Ponnuswamy_et_al.,_1980)
245 Surrounding_hydrophobicity_in_beta-sheet_(Ponnuswamy_et_al.,_1980)
246 Surrounding_hydrophobicity_in_turn_(Ponnuswamy_et_al.,_1980)
247 Accessibility_reduction_ratio_(Ponnuswamy_et_al.,_1980)
248 Average_number_of_surrounding_residues_(Ponnuswamy_et_al.,_1980)
249 Intercept_in_regression_analysis_(Prabhakaran-Ponnuswamy,_1982)
250 Slope_in_regression_analysis_x_1.0E1_(Prabhakaran-Ponnuswamy,_1982)
251 Correlation_coefficient_in_regression_analysis_(Prabhakaran-Ponnuswamy,_1982)
252 Hydrophobicity_(Prabhakaran,_1990)
253 Relative_frequency_in_alpha-helix_(Prabhakaran,_1990)
254 Relative_frequency_in_beta-sheet_(Prabhakaran,_1990)
255 Relative_frequency_in_reverse-turn_(Prabhakaran,_1990)
256 Helix-coil_equilibrium_constant_(Ptitsyn-Finkelstein,_1983)
257 Beta-coil_equilibrium_constant_(Ptitsyn-Finkelstein,_1983)
258 Weights_for_alpha-helix_at_the_window_position_of_-6_(Qian-Sejnowski,_1988)
259 Weights_for_alpha-helix_at_the_window_position_of_-5_(Qian-Sejnowski,_1988)
260 Weights_for_alpha-helix_at_the_window_position_of_-4_(Qian-Sejnowski,_1988)
261 Weights_for_alpha-helix_at_the_window_position_of_-3_(Qian-Sejnowski,_1988)
262 Weights_for_alpha-helix_at_the_window_position_of_-2_(Qian-Sejnowski,_1988)
263 Weights_for_alpha-helix_at_the_window_position_of_-1_(Qian-Sejnowski,_1988)
264 Weights_for_alpha-helix_at_the_window_position_of_0_(Qian-Sejnowski,_1988)
![Molar V1.3.1 Molar V1.3.1](/uploads/1/3/3/2/133274684/886480228.jpg)
265 Weights_for_alpha-helix_at_the_window_position_of_1_(Qian-Sejnowski,_1988)
266 Weights_for_alpha-helix_at_the_window_position_of_2_(Qian-Sejnowski,_1988)
267 Weights_for_alpha-helix_at_the_window_position_of_3_(Qian-Sejnowski,_1988)
268 Weights_for_alpha-helix_at_the_window_position_of_4_(Qian-Sejnowski,_1988)
269 Weights_for_alpha-helix_at_the_window_position_of_5_(Qian-Sejnowski,_1988)
270 Weights_for_alpha-helix_at_the_window_position_of_6_(Qian-Sejnowski,_1988)
271 Weights_for_beta-sheet_at_the_window_position_of_-6_(Qian-Sejnowski,_1988)
272 Weights_for_beta-sheet_at_the_window_position_of_-5_(Qian-Sejnowski,_1988)
![V1.3.1 V1.3.1](/uploads/1/3/3/2/133274684/245667869.jpg)
273 Weights_for_beta-sheet_at_the_window_position_of_-4_(Qian-Sejnowski,_1988)
274 Weights_for_beta-sheet_at_the_window_position_of_-3_(Qian-Sejnowski,_1988)
275 Weights_for_beta-sheet_at_the_window_position_of_-2_(Qian-Sejnowski,_1988)
276 Weights_for_beta-sheet_at_the_window_position_of_-1_(Qian-Sejnowski,_1988)
277 Weights_for_beta-sheet_at_the_window_position_of_0_(Qian-Sejnowski,_1988)
278 Weights_for_beta-sheet_at_the_window_position_of_1_(Qian-Sejnowski,_1988)
279 Weights_for_beta-sheet_at_the_window_position_of_2_(Qian-Sejnowski,_1988)
280 Weights_for_beta-sheet_at_the_window_position_of_3_(Qian-Sejnowski,_1988)
281 Weights_for_beta-sheet_at_the_window_position_of_4_(Qian-Sejnowski,_1988)
282 Weights_for_beta-sheet_at_the_window_position_of_5_(Qian-Sejnowski,_1988)
283 Weights_for_beta-sheet_at_the_window_position_of_6_(Qian-Sejnowski,_1988)
284 Weights_for_coil_at_the_window_position_of_-6_(Qian-Sejnowski,_1988)
285 Weights_for_coil_at_the_window_position_of_-5_(Qian-Sejnowski,_1988)
Molar V1.3.1 Solution
286 Weights_for_coil_at_the_window_position_of_-4_(Qian-Sejnowski,_1988)
287 Weights_for_coil_at_the_window_position_of_-3_(Qian-Sejnowski,_1988)
288 Weights_for_coil_at_the_window_position_of_-2_(Qian-Sejnowski,_1988)
289 Weights_for_coil_at_the_window_position_of_-1_(Qian-Sejnowski,_1988)
290 Weights_for_coil_at_the_window_position_of_0_(Qian-Sejnowski,_1988)
291 Weights_for_coil_at_the_window_position_of_1_(Qian-Sejnowski,_1988)
292 Weights_for_coil_at_the_window_position_of_2_(Qian-Sejnowski,_1988)
293 Weights_for_coil_at_the_window_position_of_3_(Qian-Sejnowski,_1988)
294 Weights_for_coil_at_the_window_position_of_4_(Qian-Sejnowski,_1988)
295 Weights_for_coil_at_the_window_position_of_5_(Qian-Sejnowski,_1988)
296 Weights_for_coil_at_the_window_position_of_6_(Qian-Sejnowski,_1988)
297 Average_reduced_distance_for_C-alpha_(Rackovsky-Scheraga,_1977)
298 Average_reduced_distance_for_side_chain_(Rackovsky-Scheraga,_1977)
299 Side_chain_orientational_preference_(Rackovsky-Scheraga,_1977)
300 Average_relative_fractional_occurrence_in_A0(i)_(Rackovsky-Scheraga,_1982)
301 Average_relative_fractional_occurrence_in_AR(i)_(Rackovsky-Scheraga,_1982)
302 Average_relative_fractional_occurrence_in_AL(i)_(Rackovsky-Scheraga,_1982)
303 Average_relative_fractional_occurrence_in_EL(i)_(Rackovsky-Scheraga,_1982)
304 Average_relative_fractional_occurrence_in_E0(i)_(Rackovsky-Scheraga,_1982)
305 Average_relative_fractional_occurrence_in_ER(i)_(Rackovsky-Scheraga,_1982)
306 Average_relative_fractional_occurrence_in_A0(i-1)_(Rackovsky-Scheraga,_1982)
307 Average_relative_fractional_occurrence_in_AR(i-1)_(Rackovsky-Scheraga,_1982)
308 Average_relative_fractional_occurrence_in_AL(i-1)_(Rackovsky-Scheraga,_1982)
309 Average_relative_fractional_occurrence_in_EL(i-1)_(Rackovsky-Scheraga,_1982)
310 Average_relative_fractional_occurrence_in_E0(i-1)_(Rackovsky-Scheraga,_1982)
311 Average_relative_fractional_occurrence_in_ER(i-1)_(Rackovsky-Scheraga,_1982)
312 Value_of_theta(i)_(Rackovsky-Scheraga,_1982)
313 Value_of_theta(i-1)_(Rackovsky-Scheraga,_1982)
314 Transfer_free_energy_from_chx_to_wat_(Radzicka-Wolfenden,_1988)
315 Transfer_free_energy_from_oct_to_wat_(Radzicka-Wolfenden,_1988)
316 Transfer_free_energy_from_vap_to_chx_(Radzicka-Wolfenden,_1988)
317 Transfer_free_energy_from_chx_to_oct_(Radzicka-Wolfenden,_1988)
318 Transfer_free_energy_from_vap_to_oct_(Radzicka-Wolfenden,_1988)
319 Accessible_surface_area_(Radzicka-Wolfenden,_1988)
320 Energy_transfer_from_out_to_in(95
321 Mean_polarity_(Radzicka-Wolfenden,_1988)
322 Relative_preference_value_at_N'_(Richardson-Richardson,_1988)
323 Relative_preference_value_at_N'_(Richardson-Richardson,_1988)
324 Relative_preference_value_at_N-cap_(Richardson-Richardson,_1988)
325 Relative_preference_value_at_N1_(Richardson-Richardson,_1988)
326 Relative_preference_value_at_N2_(Richardson-Richardson,_1988)
327 Relative_preference_value_at_N3_(Richardson-Richardson,_1988)
328 Relative_preference_value_at_N4_(Richardson-Richardson,_1988)
329 Relative_preference_value_at_N5_(Richardson-Richardson,_1988)
330 Relative_preference_value_at_Mid_(Richardson-Richardson,_1988)
331 Relative_preference_value_at_C5_(Richardson-Richardson,_1988)
332 Relative_preference_value_at_C4_(Richardson-Richardson,_1988)
333 Relative_preference_value_at_C3_(Richardson-Richardson,_1988)
334 Relative_preference_value_at_C2_(Richardson-Richardson,_1988)
335 Relative_preference_value_at_C1_(Richardson-Richardson,_1988)
336 Relative_preference_value_at_C-cap_(Richardson-Richardson,_1988)
337 Relative_preference_value_at_C'_(Richardson-Richardson,_1988)
338 Relative_preference_value_at_C'_(Richardson-Richardson,_1988)
339 Information_measure_for_alpha-helix_(Robson-Suzuki,_1976)
340 Information_measure_for_N-terminal_helix_(Robson-Suzuki,_1976)
341 Information_measure_for_middle_helix_(Robson-Suzuki,_1976)
342 Information_measure_for_C-terminal_helix_(Robson-Suzuki,_1976)
343 Information_measure_for_extended_(Robson-Suzuki,_1976)
344 Information_measure_for_pleated-sheet_(Robson-Suzuki,_1976)
345 Information_measure_for_extended_without_H-bond_(Robson-Suzuki,_1976)
346 Information_measure_for_turn_(Robson-Suzuki,_1976)
347 Information_measure_for_N-terminal_turn_(Robson-Suzuki,_1976)
348 Information_measure_for_middle_turn_(Robson-Suzuki,_1976)
349 Information_measure_for_C-terminal_turn_(Robson-Suzuki,_1976)
350 Information_measure_for_coil_(Robson-Suzuki,_1976)
351 Information_measure_for_loop_(Robson-Suzuki,_1976)
352 Hydration_free_energy_(Robson-Osguthorpe,_1979)
353 Mean_area_buried_on_transfer_(Rose_et_al.,_1985)
354 Mean_fractional_area_loss_(Rose_et_al.,_1985)
355 Side_chain_hydropathy,_uncorrected_for_solvation_(Roseman,_1988)
356 Side_chain_hydropathy,_corrected_for_solvation_(Roseman,_1988)
357 Loss_of_Side_chain_hydropathy_by_helix_formation_(Roseman,_1988)
358 Transfer_free_energy_(Simon,_1976),_Cited_by_Charton-Charton_(1982)
359 Principal_component_I_(Sneath,_1966)
360 Principal_component_II_(Sneath,_1966)
361 Principal_component_III_(Sneath,_1966)
362 Principal_component_IV_(Sneath,_1966)
363 Zimm-Bragg_parameter_s_at_20_C_(Sueki_et_al.,_1984)
364 Zimm-Bragg_parameter_sigma_x_1.0E4_(Sueki_et_al.,_1984)
365 Optimal_matching_hydrophobicity_(Sweet-Eisenberg,_1983)
366 Normalized_frequency_of_alpha-helix_(Tanaka-Scheraga,_1977)
367 Normalized_frequency_of_isolated_helix_(Tanaka-Scheraga,_1977)
368 Normalized_frequency_of_extended_structure_(Tanaka-Scheraga,_1977)
369 Normalized_frequency_of_chain_reversal_R_(Tanaka-Scheraga,_1977)
370 Normalized_frequency_of_chain_reversal_S_(Tanaka-Scheraga,_1977)
371 Normalized_frequency_of_chain_reversal_D_(Tanaka-Scheraga,_1977)
372 Normalized_frequency_of_left-handed_helix_(Tanaka-Scheraga,_1977)
373 Normalized_frequency_of_zeta_R_(Tanaka-Scheraga,_1977)
374 Normalized_frequency_of_coil_(Tanaka-Scheraga,_1977)
375 Normalized_frequency_of_chain_reversal_(Tanaka-Scheraga,_1977)
376 Relative_population_of_conformational_state_A_(Vasquez_et_al.,_1983)
377 Relative_population_of_conformational_state_C_(Vasquez_et_al.,_1983)
378 Relative_population_of_conformational_state_E_(Vasquez_et_al.,_1983)
379 Electron-ion_interaction_potential_(Veljkovic_et_al.,_1985)
380 Bitterness_(Venanzi,_1984)
381 Transfer_free_energy_to_lipophilic_phase_(von_Heijne-Blomberg,_1979)
382 Average_interactions_per_side_chain_atom_(Warme-Morgan,_1978)
383 RF_value_in_high_salt_chromatography_(Weber-Lacey,_1978)
384 Propensity_to_be_buried_inside_(Wertz-Scheraga,_1978)
385 Free_energy_change_of_epsilon(i)_to_epsilon(ex)_(Wertz-Scheraga,_1978)
386 Free_energy_change_of_alpha(Ri)_to_alpha(Rh)_(Wertz-Scheraga,_1978)
387 Free_energy_change_of_epsilon(i)_to_alpha(Rh)_(Wertz-Scheraga,_1978)
388 Polar_requirement_(Woese,_1973)
389 Hydration_potential_(Wolfenden_et_al.,_1981)
390 Principal_property_value_z1_(Wold_et_al.,_1987)
391 Principal_property_value_z2_(Wold_et_al.,_1987)
392 Principal_property_value_z3_(Wold_et_al.,_1987)
393 Unfolding_Gibbs_energy_in_water,_pH7.0_(Yutani_et_al.,_1987)
394 Unfolding_Gibbs_energy_in_water,_pH9.0_(Yutani_et_al.,_1987)
395 Activation_Gibbs_energy_of_unfolding,_pH7.0_(Yutani_et_al.,_1987)
396 Activation_Gibbs_energy_of_unfolding,_pH9.0_(Yutani_et_al.,_1987)
397 Dependence_of_partition_coefficient_on_ionic_strength_(Zaslavsky_et_al.,_1982)
398 Hydrophobicity_(Zimmerman_et_al.,_1968)
399 Bulkiness_(Zimmerman_et_al.,_1968)
400 Polarity_(Zimmerman_et_al.,_1968)
401 Isoelectric_point_(Zimmerman_et_al.,_1968)
402 RF_rank_(Zimmerman_et_al.,_1968)
403 Normalized_positional_residue_frequency_at_helix_termini_N4'(Aurora-Rose,_1998)
404 Normalized_positional_residue_frequency_at_helix_termini_N'_(Aurora-Rose,_1998)
405 Normalized_positional_residue_frequency_at_helix_termini_N'_(Aurora-Rose,_1998)
406 Normalized_positional_residue_frequency_at_helix_termini_N'(Aurora-Rose,_1998)
407 Normalized_positional_residue_frequency_at_helix_termini_Nc_(Aurora-Rose,_1998)
408 Normalized_positional_residue_frequency_at_helix_termini_N1_(Aurora-Rose,_1998)
409 Normalized_positional_residue_frequency_at_helix_termini_N2_(Aurora-Rose,_1998)
410 Normalized_positional_residue_frequency_at_helix_termini_N3_(Aurora-Rose,_1998)
411 Normalized_positional_residue_frequency_at_helix_termini_N4_(Aurora-Rose,_1998)
412 Normalized_positional_residue_frequency_at_helix_termini_N5_(Aurora-Rose,_1998)
413 Normalized_positional_residue_frequency_at_helix_termini_C5_(Aurora-Rose,_1998)
414 Normalized_positional_residue_frequency_at_helix_termini_C4_(Aurora-Rose,_1998)
415 Normalized_positional_residue_frequency_at_helix_termini_C3_(Aurora-Rose,_1998)
416 Normalized_positional_residue_frequency_at_helix_termini_C2_(Aurora-Rose,_1998)
417 Normalized_positional_residue_frequency_at_helix_termini_C1_(Aurora-Rose,_1998)
418 Normalized_positional_residue_frequency_at_helix_termini_Cc_(Aurora-Rose,_1998)
419 Normalized_positional_residue_frequency_at_helix_termini_C'_(Aurora-Rose,_1998)
420 Normalized_positional_residue_frequency_at_helix_termini_C'_(Aurora-Rose,_1998)
421 Normalized_positional_residue_frequency_at_helix_termini_C'_(Aurora-Rose,_1998)
422 Normalized_positional_residue_frequency_at_helix_termini_C4'_(Aurora-Rose,_1998)
423 Delta_G_values_for_the_peptides_extrapolated_to_0_M_urea_(O'Neil-DeGrado,_1990)
424 Helix_formation_parameters_(delta_delta_G)_(O'Neil-DeGrado,_1990)
425 Normalized_flexibility_parameters_(B-values),_average_(Vihinen_et_al.,_1994)
426 Normalized_flexibility_parameters_(B-values)_for_each_residue_surrounded_by_none_rigid_neighbours_(Vihinen_et_al.,_1994)
427 Normalized_flexibility_parameters_(B-values)_for_each_residue_surrounded_by_one_rigid_neighbours_(Vihinen_et_al.,_1994)
428 Normalized_flexibility_parameters_(B-values)_for_each_residue_surrounded_by_two_rigid_neighbours_(Vihinen_et_al.,_1994)
429 Free_energy_in_alpha-helical_conformation_(Munoz-Serrano,_1994)
430 Free_energy_in_alpha-helical_region_(Munoz-Serrano,_1994)
431 Free_energy_in_beta-strand_conformation_(Munoz-Serrano,_1994)
432 Free_energy_in_beta-strand_region_(Munoz-Serrano,_1994)
433 Free_energy_in_beta-strand_region_(Munoz-Serrano,_1994)
434 Free_energies_of_transfer_of_AcWl-X-LL_peptides_from_bilayer_interface_to_water_(Wimley-White,_1996)
435 Thermodynamic_beta_sheet_propensity_(Kim-Berg,_1993)
436 Turn_propensity_scale_for_transmembrane_helices_(Monne_et_al.,_1999)
437 Alpha_helix_propensity_of_position_44_in_T4_lysozyme_(Blaber_et_al.,_1993)
438 p-Values_of_mesophilic_proteins_based_on_the_distributions_of_B_values_(Parthasarathy-Murthy,_2000)
439 p-Values_of_thermophilic_proteins_based_on_the_distributions_of_B_values_(Parthasarathy-Murthy,_2000)
440 Distribution_of_amino_acid_residues_in_the_18_non-redundant_families_of_thermophilic_proteins_(Kumar_et_al.,_2000)
441 Distribution_of_amino_acid_residues_in_the_18_non-redundant_families_of_mesophilic_proteins_(Kumar_et_al.,_2000)
442 Distribution_of_amino_acid_residues_in_the_alpha-helices_in_thermophilic_proteins_(Kumar_et_al.,_2000)
443 Distribution_of_amino_acid_residues_in_the_alpha-helices_in_mesophilic_proteins_(Kumar_et_al.,_2000)
444 Side-chain_contribution_to_protein_stability_(kJ/mol)_(Takano-Yutani,_2001)
445 Propensity_of_amino_acids_within_pi-helices_(Fodje-Al-Karadaghi,_2002)
Oxygen 2.1.2. 446 Hydropathy_scale_based_on_self-information_values_in_the_two-state_model_(5
447 Hydropathy_scale_based_on_self-information_values_in_the_two-state_model_(9
448 Hydropathy_scale_based_on_self-information_values_in_the_two-state_model_(16
449 Hydropathy_scale_based_on_self-information_values_in_the_two-state_model_(20
450 Hydropathy_scale_based_on_self-information_values_in_the_two-state_model_(25
451 Hydropathy_scale_based_on_self-information_values_in_the_two-state_model_(36
452 Hydropathy_scale_based_on_self-information_values_in_the_two-state_model_(50
453 Averaged_turn_propensities_in_a_transmembrane_helix_(Monne_et_al.,_1999)
454 Alpha-helix_propensity_derived_from_designed_sequences_(Koehl-Levitt,_1999)
455 Beta-sheet_propensity_derived_from_designed_sequences_(Koehl-Levitt,_1999)
456 Composition_of_amino_acids_in_extracellular_proteins_(percent)_(Cedano_et_al.,_1997)
457 Composition_of_amino_acids_in_anchored_proteins_(percent)_(Cedano_et_al.,_1997)
458 Composition_of_amino_acids_in_membrane_proteins_(percent)_(Cedano_et_al.,_1997)
459 Composition_of_amino_acids_in_intracellular_proteins_(percent)_(Cedano_et_al.,_1997)
460 Composition_of_amino_acids_in_nuclear_proteins_(percent)_(Cedano_et_al.,_1997)
461 Surface_composition_of_amino_acids_in_intracellular_proteins_of_thermophiles_(percent)_(Fukuchi-Nishikawa,_2001)
462 Surface_composition_of_amino_acids_in_intracellular_proteins_of_mesophiles_(percent)_(Fukuchi-Nishikawa,_2001)
463 Surface_composition_of_amino_acids_in_extracellular_proteins_of_mesophiles_(percent)_(Fukuchi-Nishikawa,_2001)
464 Surface_composition_of_amino_acids_in_nuclear_proteins_(percent)_(Fukuchi-Nishikawa,_2001)
465 Interior_composition_of_amino_acids_in_intracellular_proteins_of_thermophiles_(percent)_(Fukuchi-Nishikawa,_2001)
466 Interior_composition_of_amino_acids_in_intracellular_proteins_of_mesophiles_(percent)_(Fukuchi-Nishikawa,_2001)
467 Interior_composition_of_amino_acids_in_extracellular_proteins_of_mesophiles_(percent)_(Fukuchi-Nishikawa,_2001)
468 Interior_composition_of_amino_acids_in_nuclear_proteins_(percent)_(Fukuchi-Nishikawa,_2001)
469 Entire_chain_composition_of_amino_acids_in_intracellular_proteins_of_thermophiles_(percent)_(Fukuchi-Nishikawa,_2001)
470 Entire_chain_composition_of_amino_acids_in_intracellular_proteins_of_mesophiles_(percent)_(Fukuchi-Nishikawa,_2001)
471 Entire_chain_composition_of_amino_acids_in_extracellular_proteins_of_mesophiles_(percent)_(Fukuchi-Nishikawa,_2001)
472 Entire_chain_compositino_of_amino_acids_in_nuclear_proteins_(percent)_(Fukuchi-Nishikawa,_2001)
473 Amphiphilicity_index_(Mitaku_et_al.,_2002)
474 Volumes_including_the_crystallographic_waters_using_the_ProtOr_(Tsai_et_al.,_1999)
475 Volumes_not_including_the_crystallographic_waters_using_the_ProtOr_(Tsai_et_al.,_1999)
476 Electron-ion_interaction_potential_values_(Cosic,_1994)
477 Hydrophobicity_scales_(Ponnuswamy,_1993)
478 Hydrophobicity_coefficient_in_RP-HPLC,_C18_with_0.1
479 Hydrophobicity_coefficient_in_RP-HPLC,_C8_with_0.1
480 Hydrophobicity_coefficient_in_RP-HPLC,_C4_with_0.1
481 Hydrophobicity_coefficient_in_RP-HPLC,_C18_with_0.1
482 Hydrophilicity_scale_(Kuhn_et_al.,_1995)
483 Retention_coefficient_at_pH_2_(Guo_et_al.,_1986)
484 Modified_Kyte-Doolittle_hydrophobicity_scale_(Juretic_et_al.,_1998)
485 Interactivity_scale_obtained_from_the_contact_matrix_(Bastolla_et_al.,_2005)
486 Interactivity_scale_obtained_by_maximizing_the_mean_of_correlation_coefficient_over_single-domain_globular_proteins_(Bastolla_et_al.,_2005)
487 Interactivity_scale_obtained_by_maximizing_the_mean_of_correlation_coefficient_over_pairs_of_sequences_sharing_the_TIM_barrel_fold_(Bastolla_et_al.,_2005)
488 Linker_propensity_index_(Suyama-Ohara,_2003)
489 Knowledge-based_membrane-propensity_scale_from_1D_Helix_in_MPtopo_databases_(Punta-Maritan,_2003)
490 Knowledge-based_membrane-propensity_scale_from_3D_Helix_in_MPtopo_databases_(Punta-Maritan,_2003)
491 Linker_propensity_from_all_dataset_(George-Heringa,_2003)
492 Linker_propensity_from_1-linker_dataset_(George-Heringa,_2003)
493 Linker_propensity_from_2-linker_dataset_(George-Heringa,_2003)
494 Linker_propensity_from_3-linker_dataset_(George-Heringa,_2003) Velarium 1.0 download.
Molar V1.3.1 2
495 Linker_propensity_from_small_dataset_(linker_length_is_less_than_six_residues)_(George-Heringa,_2003)
496 Linker_propensity_from_medium_dataset_(linker_length_is_between_six_and_14
497 Linker_propensity_from_long_dataset_(linker_length_is_greater_than_14
498 Linker_propensity_from_helical_(annotated_by_DSSP)_dataset_(George-Heringa,_2003)
499 Linker_propensity_from_non-helical_(annotated_by_DSSP)_dataset_(George-Heringa,_2003)
500 The_stability_scale_from_the_knowledge-based_atom-atom_potential_(Zhou-Zhou,_2004)
501 The_relative_stability_scale_extracted_from_mutation_experiments_(Zhou-Zhou,_2004)
502 Buriability_(Zhou-Zhou,_2004)
503 Linker_index_(Bae_et_al.,_2005)
504 Mean_volumes_of_residues_buried_in_protein_interiors_(Harpaz_et_al.,_1994)
505 Average_volumes_of_residues_(Pontius_et_al.,_1996)
506 Hydrostatic_pressure_asymmetry_index,_PAI_(Di_Giulio,_2005)
507 Hydrophobicity_index_(Wolfenden_et_al.,_1979)
508 Average_internal_preferences_(Olsen,_1980)
509 Hydrophobicity-related_index_(Kidera_et_al.,_1985)
510 Apparent_partition_energies_calculated_from_Wertz-Scheraga_index_(Guy,_1985)
511 Apparent_partition_energies_calculated_from_Janin_index_(Guy,_1985)
512 Apparent_partition_energies_calculated_from_Chothia_index_(Guy,_1985)
513 Weights_from_the_IFH_scale_(Jacobs-White,_1989)
514 Hydrophobicity_index,_3.0_pH_(Cowan-Whittaker,_1990)
515 Scaled_side_chain_hydrophobicity_values_(Black-Mould,_1991)
516 Hydrophobicity_scale_from_native_protein_structures_(Casari-Sippl,_1992)
517 NNEIG_index_(Cornette_et_al.,_1987)
518 SWEIG_index_(Cornette_et_al.,_1987)
519 PRIFT_index_(Cornette_et_al.,_1987)
520 PRILS_index_(Cornette_et_al.,_1987)
521 ALTFT_index_(Cornette_et_al.,_1987)
522 ALTLS_index_(Cornette_et_al.,_1987)
523 TOTFT_index_(Cornette_et_al.,_1987)
524 TOTLS_index_(Cornette_et_al.,_1987)
525 Relative_partition_energies_derived_by_the_Bethe_approximation_(Miyazawa-Jernigan,_1999)
526 Optimized_relative_partition_energies_-_method_A_(Miyazawa-Jernigan,_1999)
527 Optimized_relative_partition_energies_-_method_B_(Miyazawa-Jernigan,_1999)
528 Optimized_relative_partition_energies_-_method_C_(Miyazawa-Jernigan,_1999)
529 Optimized_relative_partition_energies_-_method_D_(Miyazawa-Jernigan,_1999)
530 Hydrophobicity_index_(Engelman_et_al.,_1986)
531 Hydrophobicity_index_(Fasman,_1989)
532 GA_APV_OUT_(Heider,_Nov_2010)
533 GAD_(Heider_et_al.,_2011)
Format
Source
References
Kawashima, S.; Ogata, H.; Kanehisa, M. Nucleic Acids Res 1999, 27, 368.
Aliases
- AAindex
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